Oma Orthologs
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OMA Orthology database
WEBOMA is a method and database for the inference of orthologs among complete genomes. We provide browsable orthology predictions, APIs, flat file downloads and a standalone …
Omabrowser.orgIdentifying orthologs with OMA: A primer - PMC - National Center …
WEBThe Orthologous Matrix (OMA) is a method and database that allows users to identify orthologs among many genomes. OMA provides three different types of orthologs: …
Ncbi.nlm.nih.govOMA orthology database: Types of orthologous groupings
WEBIn OMA, we infer and provide several sub-types of orthologs: pairwise orthologs, Hierarchical Orthologous Groups (HOGs), and OMA Groups. It is important to …
Omabrowser.orgOMA in a nutshell (Introduction)
WEBOMA is a method and database for the inference of orthologs among complete genomes. Since 2004 it has been continuesly maintained and improved. We provide browsable …
Omabrowser.orgOMA Orthology database: About - OMA Browser
WEBOMA is a method and database for the inference of orthologs among complete genomes. Since 2004 it has been continuesly maintained and improved. We provide browsable …
Corona.omabrowser.orgDrosOMA Orthology database - UNIL
WEBOMA is a method and database for the inference of orthologs among complete genomes. We provide browsable orthology predictions, APIs, flat file downloads and a standalone …
Drosoma.unil.chOMA orthology in 2024: improved prokaryote coverage, ancestral …
WEBFor more than 18 years, the OMA (‘Orthologous Matrix’) database has elucidated orthologs among complete genomes across the entire tree of life . In this update paper, we report …
Ncbi.nlm.nih.govThe OMA orthology database in 2018: retrieving evolutionary
WEBThe Orthologous Matrix (OMA) is a leading resource to relate genes across many species from all of life. In this update paper, we review the recent algorithmic …
Academic.oup.comIdentifying orthologs with OMA: A primer - ResearchGate
WEBThe Orthologous Matrix (OMA) is a method and database that allows users to identify orthologs among many genomes. OMA provides three different types of orthologs: …
Researchgate.netOMA orthology in 2021: website overhaul, conserved isoforms, …
WEBOMA provides pairwise and groupwise orthologs, functional annotations, local and global gene order conservation (synteny) information, among many other functions. This …
Academic.oup.comOrthologous Matrix (OMA) algorithm 2.0: more robust to …
WEBThose homologs can be classified as orthologs if they start diverging by speciation (human versus dog genes of same color) or as paralogs if they start diverging by duplication …
Ncbi.nlm.nih.govOMA standalone
WEBOMA standalone is a standalone package that can infer orthologs using the OMA algorithm on custom genomes. It is also possible to export genomes and their homology relations …
Omabrowser.orgAlgorithm of OMA for large-scale orthology inference
WEBThe algorithm of OMA improves upon standard bidirectional best-hit approach in several respects: it uses evolutionary distances instead of scores, considers distance inference …
Bmcbioinformatics.biomedcentral.comIdentifying orthologs with OMA: A primer | F1000Research
WEBThe Orthologous Matrix (OMA) is a method and database that allows users to identify orthologs among many genomes. OMA provides three different types of orthologs: …
F1000research.comOMA orthology in 2021: website overhaul, conserved isoforms
WEBOMA provides pairwise and groupwise orthologs, functional annotations, local and global gene order conservation (synteny) information, among many other functions. This …
Pubmed.ncbi.nlm.nih.govOMA orthology database: Types of orthologous groupings - OMA …
WEBIt is useful to distinguish between two classes of homologous genes: orthologs, which are pairs of genes that started diverging via evolutionary speciation, and paralogs, which are …
Omabrowser.orgOMA 2011: orthology inference among 1000 complete genomes
WEBOMA (Orthologous MAtrix) is a database that identifies orthologs among publicly available, complete genomes. Initiated in 2004, the project is at its 11th release. It now …
Academic.oup.comIdentifying orthologs with OMA: A primer. - Europe PMC
WEBThe Orthologous Matrix (OMA) is a method and database that allows users to identify orthologs among many genomes. OMA provides three different types of orthologs: …
Europepmc.orgOMA orthology - Database Commons - National Genomics Data …
WEBThe Orthologous Matrix (OMA) is a method and database that allows users to identify orthologs among many genomes. OMA provides three different types of orthologs: …
Ngdc.cncb.ac.cnAlgorithm of OMA for large-scale orthology inference - PMC
WEBIn OMA, we address this problem by making available both pairwise orthologous relations (the verified pairs) and groups of genes in which all pairs are orthologs. Though the …
Ncbi.nlm.nih.govCatalog of OMA Tools
WEBOMA is a method and database for the inference of orthologs among complete genomes. Since 2004 it has been continuesly maintained and improved. We provide browsable …
Omabrowser.orgOMA standalone: orthology inference among public and custom …
WEBOMA standalone enables researchers to infer high-quality orthologs among genomes or transcriptomes, on public and in-house data. It runs on a wide range of hardware, from a …
Ncbi.nlm.nih.govOrthologs between two genomes - omabrowser.org
WEBUse the following form to download the list of all predicted orthologs between a pair of genomes of interest. The result is returned either as a tab- or comma separated text file, …
Omabrowser.org